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Results 1 - 10 of about 96

Original articles in indexed journals - Computational RNA Biology

Bournazos et al (including Eyras E). Standardized practices for RNA diagnostics using clinically accessible specimens reclassifies 75% of putative splicing variants. Genetics in Medicine, 2022; 24: 130-145 

 
. PMID: 34906502 . DOI:  10.1016/j.gim.2021.09.001.

2022

Original articles in indexed journals - Computational RNA Biology

Ruiz de Garibay G, Fernandez-Garcia I, Mazoyer S, Leme de Calais F, Ameri P, Vijayakumar S, Martinez-Ruiz H, Damiola F, Barjhoux L, Thomassen M, Andersen LVB, Herranz C, Mateo F, Palomero L, Espín R, Gómez A, García N, Jimenez D, Bonifaci N, Extremera AI, Castaño J, Raya A, Eyras E, Puente XS, Brunet J, Lázaro C; GEMO; CIMBA, Radice P, Barnes DR, Antoniou AC, Spurdle AB, de la Hoya M, Baralle D, Barcellos-Hoff MH, Pujana MA. Altered regulation of BRCA1 exon 11 splicing is associated with breast cancer risk in carriers of BRCA1 pathogenic variants. Hum Mutat, 2021; 42(11): 1488-1502. PMID: 34420246 . DOI: 10.1002/humu.24276.

2021

Original articles in indexed journals - Integrative Biomedical Informatics - Computational RNA Biology

Trincado JL, Reixachs-Solé M, Pérez-Granado J, Fugmann T, Sanz F, Yokota J, Eyras E. ISOTOPE: ISOform-guided prediction of epiTOPEs in cancer. PLOS Comput Biol, 2021; 17(9): e1009411 DOI: 10.1371/journal.pcbi.1009411.

2021

Original articles in indexed journals - Computational RNA Biology

Yuen ZW, Srivastava A, Daniel R, McNevin D, Jack C, Eyras E. Systematic benchmarking of tools for CpG methylation detection from nanopore sequencing. Nat Commun, 2021; 12(1):3438. PMID: 34103501 . DOI: 10.1038/s41467-021-23778-6.

2021

Original articles in indexed journals - Computational RNA Biology

Acera Mateos P, Balboa RF, Easteal S, Eyras E*, Patel HR*. PACIFIC: a lightweight deep-learning classifier of SARS-CoV-2 and co-infecting RNA virs. Sci Rep, 2021; 11(1):3209. PMID: 33547380 . DOI: 10.1038/s41598-021-82043-4.

2021

Original articles in indexed journals - Computational RNA Biology

Pascual R, Segura-Morales C, Omerzu M, Bellora N, Belloc E, Castellazzi CL, Reina O, Eyras E, Maurice MM, Millanes-Romero A, Méndez R. mRNA spindle localization and mitotic translational regulation by CPEB1 and CPEB4. RNA, 2020; 27(3):291-302. PMID: 33323527 . DOI: 10.1261/rna.077552.120.

2020

Original articles in indexed journals - Evolutionary Genomics - Computational RNA Biology

de la Rubia I, Indi JA, Carbonell S, Lagarde J, Alba MM, Eyras E. Reference-free reconstruction and quantification of transcriptomes from long-read sequencing. bioRxiv, 2020 DOI: 10.1101/2020.02.08.939942.

2020

Original articles in indexed journals - Computational RNA Biology

Ruiz-Reche A, Srivastava A, Indi JA, de la Rubia I, Eyras E. ReorientExpress: reference-free orientation of nanopore cDNA reads with deep learning. Genome Biol, 2019; 20(1): 260. PMID: 31783882 . DOI: 10.1186/s13059-019-1884-z.

2019



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