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Results 1 - 10 of about 92

Original articles in indexed journals - Evolutionary Genomics - Computational RNA Biology

de la Rubia I, Indi JA, Carbonell S, Lagarde J, Alba MM, Eyras E. Reference-free reconstruction and quantification of transcriptomes from long-read sequencing. bioRxiv, 2020 DOI: 10.1101/2020.02.08.939942.

2020

Original articles in indexed journals - Computational RNA Biology

Ruiz-Reche A, Srivastava A, Indi JA, de la Rubia I, Eyras E. ReorientExpress: reference-free orientation of nanopore cDNA reads with deep learning. Genome Biol, 2019; 20(1): 260. PMID: 31783882 . DOI: 10.1186/s13059-019-1884-z.

2019

Original articles in indexed journals - Computational RNA Biology

Bueno C, Velasco-Hernandez T, Gutiérrez-Agüera F, Zanetti SR, Baroni ML, Sánchez-Martínez D, Molina O, Closa A, Agraz-Doblás A, Marín P, Eyras E, Varela I, Menéndez P. CD133-directed CAR T-cells for MLL leukemia: on-target, off-tumor myeloablative toxicity. Leukemia, 2019; 33, 2090-2125. PMID: 30778134 . DOI: 10.1038/s41375-019-0418-8.

2019

PhD Thesis - Computational RNA Biology

Trincado JL. Characterization of clinically relevant RNA alterations for personalized cancer medicine. Universitat Pompeu Fabra. January 28th, 2019. Thesis Director: Eyras E. 

2019

Original articles in indexed journals - Computational RNA Biology

Singh B, Trincado JL, Tatlow PJ, Piccolo SR, Eyras E. Genome Sequencing and RNA-motif Analysis Reveal Novel Damaging Non-coding Mutations in Human Tumors. Mol Cancer Res, 2018; 16(7): 1112-1124. PMID: 29592900 . DOI: 10.1158/1541-7786.MCR-17-0601.

2018

Original articles in indexed journals - Computational RNA Biology

Jayasinghe RG, Cao S, Gao Q, Wyczalkowski MA, Sengupta S, Walter MJ and the Splicing Analysis Working Group (including Eyras E). Comprehensive portrait of canonical and non-canonical splicing in cancer. Cancer Research, 2018; 78 (13 Supplement): 2362. DOI: 10.1158/1538-7445.AM2018-2362.

2018

Original articles in indexed journals - Computational RNA Biology

Jayasinghe RG, Cao S, Gao O, Wendl MC, Vo NS, Reynolds SM, Zhao Y, Climente-González H, Chai S, Wang F, Varghese R, Huang M, Liang WW, Wyczalkowski MA, Sengupta S, Li Z, Payne SH, Fenyö D, Miner JH, Walter MJ. The Cancer Genome Atlas Research Network, Vincent B, Eyras E, Chen K, Shmulevich I, Chen F, Ding L. Systematic Analysis of Splice-Site-Creating Mutations in Cancer. Cell Rep, 2018; 23(1): 270-281.e3. PMID: 29617666 . DOI: 10.1016/j.celrep.2018.03.052.

2018



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