Original articles in indexed journals - Evolutionary Genomics

Ruiz-Orera J, Verdaguer-Grau P, Villanueva-Cañas JL, Messeguer X, Alba MM. Translation of neutrally evolving peptides provides a basis for de novo gene evolution. Nat Ecol Evol, 2018; 2(5): 890-896. PMID: 29556078 . DOI: 10.1038/s41559-018-0506-6.

2018

PhD Thesis - Systems Pharmacology

​Carrascosa MC. Next generation of informatics tools for big data analytics in drug discovery. Universitat Pompeu Fabra. March, 20th 2018. Thesis Director: Mestres J.

2018

Original articles in indexed journals - Computational RNA Biology

Dotu I, Adamson SI, Coleman B, Fournier C, Ricart-Altimiras E, Eyras E, Chuang JH. SARNAclust: Semi-automatic detection of RNA protein binding motifs from immunoprecipitation data. PLoS Comput Biol, 2018; 14(3): e1006078 . PMID: 29596423 . DOI: 10.1371/journal.pcbi.1006078.

2018

Original articles in indexed journals - GPCR Drug Discovery

Kaczor AA, Bartuzi D, Stepniewski TM, Matosiuk D, Selent J. Protein-Protein Docking in Drug Design and Discovery. Methods Mol Biol, 2018; 1762:285-305. PMID: 29594778 . DOI: 10.1007/978-1-4939-7756-7_15.

2018

Original articles in indexed journals - Computational RNA Biology

Trincado JL, Entizne JC, Hysenaj G, Singh B, Skalic M, Elliott DJ, Eyras E. SUPPA2: fast, accurate, and uncertainty-aware differential splicing analysis across multiple conditions. Genome Biol, 2018; 19(1):40 . PMID: 29571299 . DOI: 10.1186/s13059-018-1417-1.

2018

Original articles in indexed journals - Structural Bioinformatics

Sánchez-Mir L, Salat-Canela C, Paulo E, Carmona M, Ayté J, Oliva B, Hidalgo E. Phospho-mimicking Atf1 mutants bypass the transcription activating function of the MAP kinase Sty1 of fission yeast. Curr Genet, 2018; 64; 1: 97-102. PMID: 28799013 . DOI: 10.1007/s00294-017-0730-7.

2018

Original articles in indexed journals - Structural Bioinformatics

Marín-López MA, Planas-Iglesias J, Aguirre-Plans J, Bonet J, Garcia-Garcia J, Fernandez-Fuentes N, Oliva B. On the mechanisms of protein interactions: predicting their affinity from unbound tertiary structures. Bioinformatics, 2018; 34; 4:  592-598. PMID: 29028891 . DOI: 10.1093/bioinformatics/btx616.

2018

Original articles in indexed journals - Computational RNA Biology

Pagès A, Dotu I, Pallarès-Albanell J, Martí E, Guigó R, Eyras E. The discovery potential of RNA processing profiles. Nucleic Acids Res, 2018;  16; 46(3): e15. PMID: 29155959 . DOI: 10.1093/nar/gkx1115.

2018

Original articles in indexed journals - Computational Biophysics

Martinez-Rosell G, Harvey MJ, De Fabritiis G. Molecular Simulation-Driven Fragment Screening for the Discovery of New CXCL12 Inhibitors. J Chem Inf Model, 2018 . PMID: 29481075 . DOI: 10.1021/acs.jcim.7b00625.

2018

Original articles in indexed journals - Computational Biophysics

Pérez A, Martínez-Rosell G, De Fabritiis G. Simulations meet machine learning in structural biology. Curr Opin Struct Biol, 2018; 49: 139-144 . PMID: 29477048 . DOI: 10.1016/j.sbi.2018.02.004.

2018