Original articles in indexed journals - Systems Pharmacology Group

Jalencas X, Mestres J. On the origins of drug polypharmacology. MedChemComm, 2013; 4 (1):80-87 DOI: 10.1039/c2md20242e.

2013

Original articles in indexed journals - Computational Genomics - Computational Genomics > Functional Genomics

Hänzelmann S, Castelo R, Guinney J. GSVA: gene set variation analysis for microarray and RNA-Seq data. BMC Bioinformatics, 2013; 16;14(1):7. PMID: 23323831 . DOI: 23323831.

2013

Original articles in indexed journals - Computational Genomics > Biomedical Genomics - Computational Genomics

Hernando H, Shannon-Lowe C, Islam AB, Al-Shahrour F, Rodriguez-Ubreva J, Rodriguez-Cortez VC, Javierre BM, Mangas C, Fernandez AF, Parra M, Delecluse HJ, Esteller M, Lopez-Granados E, Fraga MF, Lopez-Bigas N, Ballestar E. The B cell transcription program mediates hypomethylation and overexpression of key genes in Epstein-Barr virus-associated proliferative conversion. Genome Biol, 2013; 15;14(1):R3. PMID: 23320978 .

2013

Original articles in indexed journals - Computational Genomics > Evolutionary Genomics - Computational Genomics

Villanueva-Cañas JL, Laurie S, Albà MM. Improving genome-wide scans of positive selection by using protein isoforms of similar length. Genome Biol Evol, 2013; 5 (2): 457-467 . PMID: 23377868 . DOI: 10.1093/gbe/evt017 2013.

2013

PhD Thesis - Structural Bioinformatics

Planas J. On the study of 3D structure of proteins for developing new algorithms to complete the interactome and cell signalling networks. University Pompeu Fabra. Director: Oliva B. January, 23 2013

2013

Other - Computational Genomics > Biomedical Genomics - Computational Genomics

Schroeder MP, Gonzalez-Perez A, Lopez-Bigas N. Visualizing multidimensional cancer genomics data. Genome Med, 2013; 31;5(1):9. PMID: 23363777 . DOI: 10.1186/gm413.

2013

Original articles in indexed journals - Computational Genomics - Computational Genomics > Functional Genomics

Roverato A, Castelo R. Learning undirected graphical models from multiple datasets with the generalized non-rejection rate. International Journal of Approximate Reasoning, 2012; 53; 9: 1326–1335 DOI: 10.1016/j.ijar.2012.05.007.

2012

Original articles in indexed journals - Computational Genomics > Regulatory Genomics - Computational Genomics

Ballaré C, Castellano G, Gaveglia L, Althammer S, González-Vallinas J, Eyras E, Le Dily F, Zaurin R, Soronellas D, Vicent GP, Beato M. Nucleosome-Driven Transcription Factor Binding and Gene Regulation. Mol Cell, 2012; 49 (1):67-79. PMID: 23177737 . DOI: 10.1016/j.molcel.2012.10.019.

2012

Original articles in indexed journals - Computational Biochemistry and Biophysics > Computational Biophysics

Sadiq SK, Noé F, De Fabritiis G. Kinetic characterization of the critical step in HIV-1 protease maturation. Proc Natl Acad Sci U S A, 2012. PMID: 23184967 . DOI: 10.1073/pnas.1210983109.

2012

Original articles in indexed journals - Integrative Biomedical Informatics - Systems Pharmacology Group

Oliveira JL, Lopes P, Nunes T, Campos D, Boyer S, Ahlberg E, van Mulligen EM, Kors JA, Singh B, Furlong LI, Sanz F, Bauer-Mehren A, Carrascosa MC, Mestres J, Avillach P, Diallo G, Díaz Acedo C, van der Lei J. The EU-ADR Web Platform: delivering advanced pharmacovigilance tools. Pharmacoepidemiol Drug Saf, 2012; 22 (5):459-467. PMID: 23208789 . DOI: 10.1002/pds.3375.

2012