Original articles in indexed journals - Computational RNA Biology

Ruiz de Garibay G, Fernandez-Garcia I, Mazoyer S, Leme de Calais F, Ameri P, Vijayakumar S, Martinez-Ruiz H, Damiola F, Barjhoux L, Thomassen M, Andersen LVB, Herranz C, Mateo F, Palomero L, Espín R, Gómez A, García N, Jimenez D, Bonifaci N, Extremera AI, Castaño J, Raya A, Eyras E, Puente XS, Brunet J, Lázaro C; GEMO; CIMBA, Radice P, Barnes DR, Antoniou AC, Spurdle AB, de la Hoya M, Baralle D, Barcellos-Hoff MH, Pujana MA. Altered regulation of BRCA1 exon 11 splicing is associated with breast cancer risk in carriers of BRCA1 pathogenic variants. Hum Mutat, 2021; 42(11): 1488-1502. PMID: 34420246 . DOI: 10.1002/humu.24276.

2021

Original articles in indexed journals - Integrative Biomedical Informatics

Callegaro G, Kunnen SJ, Trairatphisan P, Grosdidier S, Niemeijer M, den Hollander W, Guney E, Piñero Gonzalez J, Furlong L, Webster YW, Saez-Rodriguez J, Sutherland JJ, Mollon J, Stevens JL, van de Water B. The human hepatocyte TXG-MAPr: gene co-expression network modules to support mechanism-based risk assessment. Arch Toxicol, 2021; 95(12):3745-3775. PMID: 34626214 . DOI: 10.1007/s00204-021-03141-w.

2021

Original articles in indexed journals - NeuroGenomics

Shibata M, Pattabiraman K, Lorente-Galdos B, Andrijevic D, Kim SK, Kaur N, Muchnik SK, Xing X, Santpere G, Sousa AMM, Sestan N. Regulation of prefrontal patterning and connectivity by retinoic acid. Nature, 2021; 598: 483-488. PMID: 34599305 . DOI: 10.1038/s41586-021-03953-x.

2021

Original articles in indexed journals - Structural Bioinformatics

Farré X, Molina R, Barteri F, Timmers PRHJ, Joshi PK, Oliva B, Acosta S, Esteve-Altava B, Navarro A, Muntané G. Comparative Analysis of Mammal Genomes Unveils Key Genomic Variability for Human Life Span. Mol Biol Evol, 2021; 38(11): 4948-4961. PMID: 34297086 . DOI: 10.1093/molbev/msab219.

2021

Original articles in indexed journals - Integrative Biomedical Informatics - Computational RNA Biology

Trincado JL, Reixachs-Solé M, Pérez-Granado J, Fugmann T, Sanz F, Yokota J, Eyras E. ISOTOPE: ISOform-guided prediction of epiTOPEs in cancer. PLOS Comput Biol, 2021; 17(9): e1009411 DOI: 10.1371/journal.pcbi.1009411.

2021

Original articles in indexed journals - NeuroGenomics

de Martin X, Sodaei R, Santpere G. Mechanisms of Binding Specificity among bHLH Transcription Factors. Int J Mol Sci, 2021; 22 (17): 9150 DOI: 10.3390/ijms22179150.

2021

Original articles in indexed journals - Computational Science

Olehnovics E, Yin JQ, Perez A, De Fabritiis G, Bonomo RA, Bhowmik D, Haider S. The Role of Hydrophobic Nodes in the Dynamics of Class A β-Lactamases. Front Microbiol, 2021; 12: 72099 DOI: 10.3389/fmicb.2021.720991.

2021

Original articles in indexed journals - NeuroGenomics

Aldinger KA, Thomson Z, Phelps IG,  Haldipur P, Deng M, Timms AE, Hirano M, Santpere G at al. Spatial and cell type transcriptional landscape of human cerebellar development. Nat Neurosci, 2021; 24(8):1163-1175. PMID: 34140698 . DOI: 10.1038/s41593-021-00872-y.

2021

Original articles in indexed journals - GPCR Drug Discovery

Giubilaro J, Schuetz DA, Stepniewski T, Namkung Y, Khoury E, Lara-Márquez M, Campbell S, Beautrait A, Armando S, Radresa O, Duchaine J, Lamarche-Vane N, Claing A, Selent J, Bouvier M, Marinier A, Laporte SA*. Discovery of a dual Ras and ARF6 inhibitor from a GPCR endocytosis screen. Nat Commun 2021; 12(1): 4688. PMID: 34344896 . DOI: 10.1038/s41467-021-24968-y.

2021

Original articles in indexed journals - Integrative Biomedical Informatics

Aerts H, Kalra D, Sáez C, Ramírez-Anguita JM, Mayer MA, Garcia-Gomez JM, Durà-Hernández M, Thienpont G, Coorevits P. Quality of Hospital Electronic Health Record (EHR) Data Based on the International Consortium for Health Outcomes Measurement (ICHOM) in Heart Failure: Pilot Data Quality Assessment Study. JMIR Med Inform, 2021; 4; 9(8): e27842. PMID: 34346902 . DOI: 10.2196/27842.

2021