Original articles in indexed journals - Integrative Biomedical Informatics - Computational RNA Biology

Trincado JL, Reixachs-Solé M, Perez-Granado J, Fugmann T, Sanz F, Yokota J, Eyras E. ISOTOPE: ISOform-guided prediction of epiTOPEs in cancer. PLOS Comput Biol, 2021; 17(9): e1009411 DOI: 10.1371/journal.pcbi.1009411.

2021

Original articles in indexed journals - Integrative Biomedical Informatics

Aerts H, Kalra D, Sáez C, Ramírez-Anguita JM, Mayer MA, Garcia-Gomez JM, Durà-Hernández M, Thienpont G, Coorevits P. Quality of Hospital Electronic Health Record (EHR) Data Based on the International Consortium for Health Outcomes Measurement (ICHOM) in Heart Failure: Pilot Data Quality Assessment Study. JMIR Med Inform, 2021; 4; 9(8): e27842. PMID: 34346902 . DOI: 10.2196/27842.

2021

Original articles in indexed journals - Integrative Biomedical Informatics

Real de Asua D, Mayer MA, Ortega MdC, Borrel JM, Bermejo TdJ, González-Lamuño D, Manso C, Moldenhauer F, Carmona-Iragui M, Hüls A, Sherman SL, Strydom A, de la Torre R, Dierssen M on behalf of the Spanish Trisomy 21 Research Society COVID-19 Taskforce. Comparison of COVID-19 and Non-COVID-19 Pneumonia in Down Syndrome. J Clin Med, 2021; 10(16): 3748 . PMID: 34442043 . DOI: 10.3390/jcm101637.

2021

Original articles in indexed journals - Integrative Biomedical Informatics

Giannoula A, Centeno E, Mayer MA, Sanz F, Furlong LI. A system-level analysis of patient disease trajectories based on clinical, phenotypic and molecular similarities. Bioinformatics, 2021; 37(10):1435-1443.. PMID: 33185649 . DOI: 10.1093/bioinformatics/btaa964.

2021

Original articles in indexed journals - Integrative Biomedical Informatics

Piñero J, Saüch J, Sanz F, Furlong LI. The DisGeNET cytoscape app: Exploring and visualizing disease genomics data. Comput Struct Biotec, 2021; 19: 2960-2967
  DOI: 10.1016/ j.csbj.2021.05.015.

2021

Original articles in indexed journals - Integrative Biomedical Informatics

Martín-Sánchez A, Piñero J, Nonell L, Arnal M, Ribe EM, Nevado-Holgado A, Lovestone S, Sanz F, Furlong LI, Valverde O. Comorbidity between Alzheimer's disease and major depression: a behavioural and transcriptomic characterization study in mice. Alzheimers Res Ther, 2021;13(1):73. PMID: 33795014 . DOI: 10.1186/s13195-021-00810-x.

2021

Original articles in indexed journals - Integrative Biomedical Informatics - PharmacoInformatics

Pastor M, Gómez-Tamayo JC, Sanz F. Flame: an open source framework for model development, hosting, and usage in production environments. J Cheminform, 2021; 13(1): 31 DOI: https://doi.org/10.1186/s13321-021-00509-z.

2021

Original articles in indexed journals - Integrative Biomedical Informatics

Mortier P, Vilagut G, Ferrer M, Alayo I, Bruffaerts R, Cristóbal-Narváez P, Del Cura-González I, Domènech-Abella J, Felez-Nobrega M, Olaya B, Pijoan JI, Vieta E, Pérez-Solà V, Kessler RC, Haro JM, Alonso J; MINDCOVID Working group. Thirty-day suicidal thoughts and behaviours in the Spanish adult general population during the first wave of the Spain COVID-19 pandemic. Epidemiol Psychiatr Sci, 2021; 30:e19. PMID: 34187614 . DOI: 10.1017/S2045796021000093.

2021

Original articles in indexed journals - Integrative Biomedical Informatics - PharmacoInformatics

Pognan F, Steger-Hartmann T, Díaz C, Blomberg N, Bringezu F, Briggs K, Callegaro G, Capella-Gutierrez S, Centeno E, Corvi J, Drew P, Drewe WC, Fernández JM, Furlong LI, Guney E, Kors JA, Mayer MA, Pastor M, Piñero J, Ramírez-Anguita JM, Ronzano F, Rowell P, Saüch-Pitarch J, Valencia A, van de Water B, van der Lei J, van Mulligen E, Sanz F. The eTRANSAFE Project on Translational Safety Assessment through Integrative Knowledge Management: Achievements and Perspectives. Pharmaceuticals (Basel), 2021; 14(3):237 DOI: 10.3390/ph14030237.

2021

Original articles in indexed journals - Integrative Biomedical Informatics

Hüls A, Costa ACS, Dierssen M, Baksh RA, Bargagna S, Baumer NT, Brandão AC, Carfi A, Carmona-Iragui M, Chicoine BA, Ghosh S, Lakhanpaul M, Manso C, Mayer MA, Ortega MDC, de Asua DR, Rebillat AS, Russell LA, Sgandurra G, Valentini D, Sherman SL, Strydom A; T21RS COVID-19 Initiative. Medical vulnerability of individuals with Down syndrome to severe COVID-19-data from the Trisomy 21 Research Society and the UK ISARIC4C survey. EClinicalMedicine, 2021; 33: 100769. PMID: 33644721 . DOI: 10.1016/j.eclinm.2021.100769.

2021