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Original articles in indexed journals - Computational RNA Biology - Computational Genomics - group

Shen M, Eyras E, Wu J, Khanna A, Josiah S, Rederstorff M, Zhang MQ, Stamm S. Direct cloning of double-stranded RNAs from RNase protection analysis reveals processing patterns of C/D box snoRNAs and provides evidence for widespread antisense transcript expression. Nucleic acids research, 2011; 

39 (22):9720-9730. PMID: 21880592 . DOI: 10.1093/nar/gkr684 DEC 2011.

2011

PhD Thesis - Evolutionary Genomics - Computational Genomics - group

Shikagaie M. Characterization of UL1, a member of the human cytomegalovirus RL11 gene family. Universitat Pompeu Fabra. Director: Miguel Lopez-Botet. Co-director: Mar Alba. November, 7 2011

2011

Original articles in indexed journals - Computational RNA Biology - Computational Genomics - group

Fernandez N, Fernandez-Miragall O, Ramajo J, Garcia-Sacristan A, Bellora N, Eyras E, Briones C, Martinez-Salas E. Structural basis for the biological relevance of the invariant apical stem in IRES-mediated translation. Nucleic Acids Research, 2011; 39 (19): 8572-8585. PMID: 21742761 . DOI: 10.1093/nar/gkr560.

2011

Original articles in indexed journals - Computational RNA Biology - Computational Genomics - group

Althammer S, Gonzalez-Vallinas J, Ballare C, Beato M, Eyras E. Pyicos: A versatile toolkit for the analysis of high-throughput sequencing data. Bioinformatics, 2011;27 (24): 3333-3340. PMID: 21994224 . DOI: 10.1093/bioinformatics/btr570.

2011

Original articles in indexed journals - Evolutionary Genomics - Computational Genomics - group

Engel P, PĂ©rez-Carmona N, Alba MM, Robertson K, Ghazal P, Angulo A. Human cytomegalovirus UL7, a homologue of the SLAM-family receptor CD229, impairs cytokine production. Immunol Cell Biol,  2011; 89 (7): 753-766  . PMID: 21670740 . DOI: 10.1038/icb.2011.55.

2011

Original articles in indexed journals - Computational RNA Biology - Computational Genomics - group

Meyer M, Plass M, Perez-Valle J, Eyras E, Vilardell J. Deciphering 3'ss Selection in the Yeast Genome Reveals an RNA Thermosensor that Mediates Alternative Splicing. Molecular Cell, 2011; 43(6):1033-1039. PMID: 21925391 . DOI: 10.1016/j.molcel.2011.07.030.

2011

Original articles in indexed journals - Computational Genomics - group

Perez-Llamas C, Gundem G, Lopez-Bigas N. Integrative Cancer Genomics (IntOGen) in Biomart. Database (Oxford) 2011:bar039. PMID: 21903633 . DOI: 10.1093/database/bar039.

2011

Original articles in indexed journals - Computational Genomics - group

Truscott M, Islam ABMMK, Lopez-Bigas N, Frolov MV. mir-11 limits the proapoptotic function of its host gene, dE2f1. Genes & Development, 2011; 25 (17): 1820-1834. PMID: 21856777 . DOI: 10.1101/gad.16947411.

2011

Original articles in indexed journals - Computational Genomics - group

Islam AB, Richter WF, Jacobs LA, Lopez-Bigas N, Benevolenskaya EV. Co-regulation of histone-modifying enzymes in cancer. PLoS One 2011;6(8):e24023. PMID: 21886846 . DOI: 10.1371/journal.pone.0024023.

2011

PhD Thesis - Computational RNA Biology - Computational Genomics - group

Plass Portulas, M. Comparative analysis of splicing in eukaryotes. Universitat Pompeu Fabra. Director: Eduardo Eyras. Julio 2011

2011



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