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Original articles in indexed journals - Computational Biophysics

Sadiq SK, de Fabritiis G. Explicit solvent dynamics and energetics of HIV-1 protease flap opening and closing. Proteins 2010; 78(14): 2873-2885. PMID: 20715057 . DOI: 10.1002/prot.22806.

2010

Original articles in indexed journals - Computational Biophysics

Giorgino T, Harvey M, de Fabritiis G. Distributed computing as a virtual supercomputer: tools to run and manage large-scale BOINC simulations. Comput Phys Commun, 2010; 181 (8): 1402-1409 DOI: 10.1016/j.cpc.2010.04.007.

2010

Original articles in indexed journals - Integrative Biomedical Informatics - PharmacoInformatics - Computational Biophysics - GPCR Drug Discovery

Selent J, Sanz F, Pastor M, de Fabritiis G. Induced effects of sodium ions on dopaminergic G-protein coupled receptors. PLoS Comput Biol 2010; 6(8): e1000884. . PMID: 20711351 . DOI: 10.1371/journal.pcbi.1000884.

2010

Original articles in indexed journals - Computational Biochemistry - Computational Biophysics

Cooper J, Cervenansky F, de Fabritiis G, Fenner J, Friboulet D, Giorgino T, Manos S, Martelli Y, Villa-Freixa J, Zasada S, Lloyd S, McCormack K, Coveney PV. The Virtual Physiological Human TOOLKIT. Philos T Roy Soc A, 2010; 368(1925): 3925-3936. PMID: 20643685 . DOI: 10.1098/rsta.2010.0144.

2010

Original articles in indexed journals - Computational Biochemistry - Computational Biophysics

De Lomana ALG, Beg QK, De Fabritiis G, Villa-Freixa J. Statistical Analysis of Global Connectivity and Activity Distributions in Cellular Networks. Journal of Computational Biology. 2010 Jul;17(7):869-78. PMID: 20632868 . DOI: 10.1089/cmb.2008.0240.

2010

Original articles in indexed journals - Computational Biophysics

Buch I, Harvey MJ, Giorgino T, Anderson DP, De Fabritiis G. High-Throughput All-Atom Molecular Dynamics Simulations Using Distributed Computing. J Chem Inf Model, 2010; 50(3); 397-403. PMID: 20199097 . DOI: 10.1021/ci900455r.

2010

Original articles in indexed journals - Computational Biophysics

Giorgino T, Tormene P, Maggioni G, Pistarini C, Quaglini S. Wireless Support to Poststroke Rehabilitation: MyHeart's Neurological Rehabilitation Concept. Ieee T Inf Technol B 2009; 13(6): 1012-1018.. PMID: 19643710 . DOI: 10.1109.

2009

Original articles in indexed journals - Computational Biophysics

Giorgino T. Computing and Visualizing Dynamic Time Warping Alignments in R: The dtw Package. J Stat Softw 2009; 31(7): 1-24.

2009

Original articles in indexed journals - Computational Biochemistry - Computational Biophysics

Guix FX, Ill-Raga G, Bravo R, Nakaya T, de Fabritiis G, Coma M, Miscione GP, Villa-Freixa J, Suzuki T, Fernandez-Busquets X, Valverde MA, de Strooper B, Muñoz FJ. Amyloid-dependent triosephosphate isomerase nitrotyrosination induces glycation and tau fibrillation. Brain, 2009;132(Pt 5):1335-45. PMID: 19251756 . DOI: 10.1093.

2009

Original articles in indexed journals - Computational Biophysics

Harvey M, de Fabritiis G. An Implementation of the Smooth Particle Mesh Ewald Method on GPU Hardware. J Chem Theory Comput 2009; 5(9): 2371-2377 DOI: 10.1021/ct900275y.

2009



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