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Original articles in indexed journals - Computational Biophysics

Giorgino T. Computing and Visualizing Dynamic Time Warping Alignments in R: The dtw Package. J Stat Softw 2009; 31(7): 1-24.

2009

Original articles in indexed journals - Computational Biochemistry - Computational Biophysics

Guix FX, Ill-Raga G, Bravo R, Nakaya T, de Fabritiis G, Coma M, Miscione GP, Villa-Freixa J, Suzuki T, Fernandez-Busquets X, Valverde MA, de Strooper B, Muñoz FJ. Amyloid-dependent triosephosphate isomerase nitrotyrosination induces glycation and tau fibrillation. Brain, 2009;132(Pt 5):1335-45. PMID: 19251756 . DOI: 10.1093.

2009

Original articles in indexed journals - Computational Biophysics

Harvey M, de Fabritiis G. An Implementation of the Smooth Particle Mesh Ewald Method on GPU Hardware. J Chem Theory Comput 2009; 5(9): 2371-2377 DOI: 10.1021/ct900275y.

2009

Original articles in indexed journals - Computational Biophysics

Giorgino T, Tormene P, Lorussi F, De Rossi D, Quaglini S. Sensor evaluation for wearable strain gauges in neurological rehabilitation. IEEE T Neur Sys Reh 2009; 17(4): 409-415.. PMID: 19366646 . DOI: 10.1109.

2009

Original articles in indexed journals - Computational Biophysics

Harvey M, Giupponi G, De Fabritiis G. ACEMD : Accelerating bio-molecular dynamics in the microsecond time-scale. J Chem Theory Comput. 2009, 5, 1632. DOI: 10.1021/ct9000685.

2009

Original articles in indexed journals - Computational Biophysics

Harvey M, De Fabritiis G, Giupponi G. Accuracy of the Lattice Boltzmann method on the Cell processor, Phys. Rev. E 78, 056702 (2008). PMID: 19113232 .

2008

Original articles in indexed journals - Computational Biophysics

Giupponi G, Harvey M, De Fabritiis G. The impact of accelerator processors for high-throughput molecular modeling and simulation. Drug Discovery Today 13, 1052. PMID: 18762274 .

2008

Original articles in indexed journals - Computational Biochemistry - Computational Biophysics

de Fabritiis G, Coveney PV, Villà-Freixa, J.Energetics of K+ permeability through Gramicidin A by forward-reverse steered molecular dynamics.Proteins: Structure, Function and Bioinformatics 2008 Oct;73(1):185-94.

. PMID: 18412256 .

2008

Reviews in indexed journals - Computational Biophysics

Delgado-Buscalioni R, Coveney PV, de Fabritiis G. Towards multiscale modelling of complex liquids, Proceedings of the Institution of Mechanical Engineers, Part C: Journal of Mechanical Engineering Science 2008. 222;769 DOI: 10.1243/09544062JMES746.

2008

Original articles in indexed journals - Computational Biophysics

De Fabritiis G, Geroult S, Coveney PV, Waksman G. Insights from the energetics of water binding at the domain-ligand interface of the Src SH2 domain. Proteins 2008. 72;1290. PMID: 18384045 . DOI: 10.1002/prot.22027.

2008



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