Original articles in indexed journals - Computational RNA Biology

Kremsky I, Bellora N, Eyras E. A Quantitative Profiling Tool for Diverse Genomic Data Types Reveals Potential Associations between Chromatin and Pre-mRNA Processing. PLoS One, 2015; 10(7): e0132448. PMID: 26207626 . DOI: 10.1371/journal.pone.0132448. eCollection 2015.

2015

Original articles in indexed journals - Computational RNA Biology

Gonzalez-Vallinas J, Pages A, Singh B, Eyras E. A semi-supervised approach uncovers thousands of intragenic enhancers differentially activated in human cells. BMC Genomics, 2015; 16. PMID: 26169177 . DOI: 10.1186/s12864-015-1704-0.

2015

Original articles in indexed journals - Structural Bioinformatics

Oliva B, Fernandez-Fuentes N. Knowledge-based modeling of peptides at protein interfaces: PiPreD. Bioinformatics, 2015; 31 (9): 1405-1410. PMID: 25540186 . DOI: 10.1093/bioinformatics/btu838 MAY 1 2015.

2015

Original articles in indexed journals - Computational Biophysics

Harvey MJ, De Fabritiis G. AceCloud: Molecular Dynamics Simulations in the Cloud. Journal of Chemical Information and Modeling, 2015; 55 (5):909-914. PMID: 25849093 . DOI: 10.1021/acs.jcim.5b00086 MAY 2015.

2015

Original articles in indexed journals - Integrative Biomedical Informatics - PharmacoInformatics

Sanz F, Carrio P, Lopez O, Capoferri L, Kooi DP, Vermeulen NPE, Geerke DP, Montanari F, Ecker GF, Schwab CH, Kleinoder T, Magdziarz T, Pastor M. Integrative Modeling Strategies for Predicting Drug Toxicities at the eTOX Project. Mol Inform, 2015; 34 (6-7):477-484; SI DOI: 10.1002/minf.201400193.

2015

Original articles in indexed journals - Computational RNA Biology

Alamancos GP, Pagès A, Trincado JL, Bellora N, Eyras E. Leveraging transcript quantification for fast computation of alternative splicing profiles. RNA, 2015; 21 (9): 1521-1531
. PMID: 26179515 . DOI: 10.1261/rna.051557.115 SEP 2015.

2015

Original articles in indexed journals - Integrative Biomedical Informatics

Fehér T, Libis V, Carbonell P, Faulon JL. A Sense of Balance: Experimental Investigation and Modeling of a Malonyl-CoA Sensor in Escherichia coli. Front Bioeng Biotechnol, 2015; 3: 46 . PMID: 25905101 . DOI: 10.3389/fbioe.2015.00046. eCollection 2015..

2015

Original articles in indexed journals - Integrative Biomedical Informatics

Gutiérrez-Sacristán A, Grosdidier S, Valverde O, Torrens M, Bravo A, Piñero J, Sanz F, Furlong LI. PsyGeNET: a knowledge platform on psychiatric disorders and their genes. Bioinformatics, 2015; 31 (18): 3075-3077 . PMID: 25964630 . DOI: 10.1093/bioinformatics/btv301 SEP 15 2015.

2015

Original articles in indexed journals - Evolutionary Genomics

Baldo L, Riera JL, Tooming-Klunderud A, Alba MM, Salzburger W. Gut Microbiota Dynamics during Dietary Shift in Eastern African Cichlid Fishes. PLoS ONE, 2015; 10(5): e0127462. PMID: 25978452 . DOI: 10.1371/journal.pone.0127462 MAY 15 2015.

2015

Original articles in indexed journals - Evolutionary Genomics

Radó-Trilla N, Arató K, Pegueroles C, Raya A, de la Luna S, Alba MM. Key role of amino acid repeat expansions in the functional diversification of duplicated transcription factors. Mol Biol Evol, 2015; 32 (9):2263-2272 . PMID: 25931513 . DOI: 10.1093/molbev/msv103 SEP 2015.

2015