Original articles in indexed journals - Structural Bioinformatics

Cuesta AM, Sánchez-Martín D, Sanz L, Bonet J, Compte M, Kremer L, Blanco FJ, Oliva B, Alvarez-Vallina L. In vivo tumor targeting and imaging with engineered trivalent antibody fragments containing collagen-derived sequences. PLoS One. 2009;4(4):e5381. PMID: 19401768 . DOI: 10.1371/journal.pone.0005381.

2009

Original articles in indexed journals - Computational Genomics > Regulatory Genomics - Computational Genomics

Elsik CG, Tellam RL, Worley KC, Bovine Genome Sequencing Anal C. The Genome Sequence of Taurine Cattle: A Window to Ruminant Biology and Evolution. Science. 2009 Apr;324(5926): 522-8. PMID: 19390049 . DOI: 10.1126.

2009

Original articles in indexed journals - PharmacoInformatics

Bergmann R, Liljefors T, Sorensen MD, Zamora I. SHOP: Receptor-Based Scaffold HOPping by GRID-Based Similarity Searches. J Chem Inf Model 2009; 49(3): 658-669. PMID: 19265417 . DOI: 10.1021.

2009

Original articles in indexed journals - Computational Genomics > Regulatory Genomics - Computational Genomics

Koscielny G, Le Texier V, Gopalakrishnan C, Kumanduri V, Riethoven JJ, Nardone F, Stanley E, Fallsehr C, Hofmann O, Kull M, Harrington E, Boué S, Eyras E, Plass M, Lopez F, Ritchie W, Moucadel V, Ara T, Pospisil H, Herrmann A, G Reich J, Guigó R, Bork P, Doeberitz MK, Vilo J, Hide W, Apweiler R, Thanaraj TA, Gautheret D. ASTD: The Alternative Splicing and Transcript Diversity database. Genomics, 2009; 93 (3): 213-20. PMID: 19059335 . DOI: 10.1016/j.ygeno.2008.11.003.

2009

Original articles in indexed journals - Computational Genomics > Evolutionary Genomics - Computational Genomics

Salichs E, Ledda A, Mularoni L, Alba MM, de la Luna S. Genome-wide analysis of histidine repeats reveals their role in the localization of human proteins to the nuclear speckles compartment. Plos Genetics 2009, 5(3): e1000397.. PMID: 19266028 . DOI: 10.1371/journal.pgen.1000397.

2009

Original articles in indexed journals - Integrative Biomedical Informatics - PharmacoInformatics

Ortega R, Raviña E, Masaguer CF, Areias F, Brea J, Loza MI, López L, Selent J, Pastor M, Sanz F. Synthesis, binding affinity and SAR of new benzolactam derivatives as dopamine D3 receptor ligands. Bioorg Med Chem Lett 2009; 19: 1773–8. PMID: 19217777 . DOI: 10.1016.

2009

Original articles in indexed journals - PharmacoInformatics

Fontaine F, Cross S, Plasencia G, Pastor M, Zamora I. SHOP: A Method for Structure-Based Fragment and Scaffold Hopping. Chem Med Chem. 2009; 4(3): 427-39. PMID: 19152365 . DOI: 10.1002.

2009

Original articles in indexed journals - Computational Genomics > Evolutionary Genomics - Computational Genomics - Computational Genomics > Functional Genomics

Toll-Riera M, Bosch N, Bellora N, Castelo R, Armengol Ll, Estivill X, Alba MM. Origin of primate orphan genes: a comparative genomics approach. Mol Biol Evol, 2009, 26: 603-612. PMID: 19064677 . DOI: 10.1093/molbev/msn281.

2009

Original articles in indexed journals - Computational Genomics > Evolutionary Genomics - Computational Genomics

Campanella C, Marino-Gammazza A, Mularoni L, Cappello F, Zummo G, Di Felice V. A comparative analysis of the products of GROEL-1 gene from Chlamydia trachomatis serovar D and the HSP60 var1 transcript from Homo sapiens suggests a possible autoimmune response. Int J Immunogenet 2009;36(1):73-78. PMID: 19207939 . DOI: 10.1111.

2009

Original articles in indexed journals - Computational Genomics - Computational Genomics > Functional Genomics

Castelo R, Roverato A. Reverse engineering molecular regulatory networks from microarray data with qp-graphs, J Comput Biol, 2009, 16(2):213-227. PMID: 19178140 . DOI: 10.1089.

2009