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Original articles in indexed journals - Computational Genomics - group

Hernando H, Shannon-Lowe C, Islam AB, Al-Shahrour F, Rodriguez-Ubreva J, Rodriguez-Cortez VC, Javierre BM, Mangas C, Fernandez AF, Parra M, Delecluse HJ, Esteller M, Lopez-Granados E, Fraga MF, Lopez-Bigas N, Ballestar E. The B cell transcription program mediates hypomethylation and overexpression of key genes in Epstein-Barr virus-associated proliferative conversion. Genome Biol, 2013; 14 (1): R3. PMID: 23320978 . DOI: 10.1186/gb-2013-14-1-r3.

2013

Original articles in indexed journals - Computational Genomics - group - Functional Genomics

Hänzelmann S, Castelo R, Guinney J. GSVA: gene set variation analysis for microarray and RNA-Seq data. BMC Bioinformatics, 2013; 16;14(1):7. PMID: 23323831 . DOI: 10.1186/1471-2105-14-7.

2013

Original articles in indexed journals - Systems Pharmacology

Jalencas X, Mestres J. On the origins of drug polypharmacology. MedChemComm, 2013; 4 (1):80-87 DOI: 10.1039/c2md20242e.

2013

Original articles in indexed journals - Integrative Biomedical Informatics

Furlong LI. Human diseases through the lens of network biology.  Trends Genet, 2012; 29 (3):150-159. PMID: 23219555 . DOI: 10.1016/j.tig.2012.11.004.

2012

Original articles in indexed journals - Computational Genomics - group - Functional Genomics

Roverato A, Castelo R. Learning undirected graphical models from multiple datasets with the generalized non-rejection rate. International Journal of Approximate Reasoning, 2012; 53; 9: 1326–1335 DOI: 10.1016/j.ijar.2012.05.007.

2012

Original articles in indexed journals - Computational Biophysics

Sadiq SK, Noé F, De Fabritiis G. Kinetic characterization of the critical step in HIV-1 protease maturation. Proc Natl Acad Sci U S A, 2012; 109; 50: 20449-20454. PMID: 23184967 . DOI: 10.1073/pnas.1210983109.

2012

Original articles in indexed journals - Computational Genomics - group

Gonzalez-Perez A, Deu-Pons J, Lopez-Bigas N. Improving the prediction of the functional impact of cancer mutations by baseline tolerance transformation. Genome Med, 2012; 4(11):89. PMID: 23181723 .

2012

Original articles in indexed journals - Computational RNA Biology - Computational Genomics - group

Ballaré C, Castellano G, Gaveglia L, Althammer S, González-Vallinas J, Eyras E, Le Dily F, Zaurin R, Soronellas D, Vicent GP, Beato M. Nucleosome-Driven Transcription Factor Binding and Gene Regulation. Mol Cell, 2012; 49 (1):67-79. PMID: 23177737 . DOI: 10.1016/j.molcel.2012.10.019.

2012

Original articles in indexed journals - Computational Genomics - group - Functional Genomics

Mahdi T, Hanzelmann S, Salehi A et al. Secreted frizzled-related protein 4 reduces insulin secretion and is overexpressed in type 2 diabetes. Cell metabolism, 2012; 16; 5: 625-33. PMID: 23140642 . DOI: 10.1016/j.cmet.2012.10.009.

2012

Original articles in indexed journals - Computational RNA Biology - Computational Genomics - group

Nadal-Ribelles M, Conde N, Flores O, Gonzalez-Vallinas J, Eyras E, Orozco M, de Nadal E, Posas F. Hog1 bypasses stress-mediated down-regulation of transcription by RNA polymerase II redistribution and chromatin remodeling. Genome Biol, 2012; 13(11): R106. PMID: 23158682 . DOI: 10.1186/gb-2012-13-11-r106 2012.

2012



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