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Original articles in indexed journals - Computational Genomics - group

Ng S, Collisson EA, Sokolov A, Goldstein T, Gonzalez-Perez A, Lopez-Bigas N, Benz C, Haussler D, Stuart JM. PARADIGM-SHIFT predicts the function of mutations in multiple cancers using pathway impact analysis. Bioinformatics, 2012; 15;28(18): i640-i646. PMID: 22962493 . DOI: 10.1093/bioinformatics/bts402.

2012

Original articles in indexed journals - Structural Bioinformatics

Wright RH, Castellano G, Bonet J, Le Dily F, Font-Mateu J, Ballaré C, Nacht AS, Soronellas D, Oliva B, Beato M. CDK2-dependent activation of PARP-1 is required for hormonal gene regulation in breast cancer cells. Genes Dev, 2012; 26(17):1972-83 . PMID: 22948662 . DOI: 10.1101/gad.193193.112.

2012

Original articles in indexed journals - Computational Biophysics

Harvey MJ, De Fabritiis G. A Survey of Computational Molecular Science using Graphics Processing Units. WIREs Comput Mol Sci, 2012; 2: 734-742 DOI: 10.1002/wcms.1101.

2012

Original articles in indexed journals - PharmacoInformatics - GPCR Drug Discovery

Kaczor AA, Guixà-González R, Carrió P, Obiol-Pardo C, Pastor M, Selent J. Fractal dimension as a measure of surface roughness of G protein-coupled receptors: implications for structure and function. J Mol Model, 2012; 18 (9):4465-4475 . PMID: 22643967 . DOI: 10.1007/s00894-012-1431-2.

2012

Original articles in indexed journals - Systems Pharmacology

Carrascosa MC, Massaguer OL, Mestres J. PharmaTrek: A Semantic Web Explorer for Open Innovation in Multitarget Drug Discovery. Mol Inf, 2012; 31 (8):537-541. PMID: 23548981 . DOI: 10.1002/minf.201200070.

2012

Original articles in indexed journals - Computational RNA Biology - Computational Genomics - group

Althammer S, Pages A, Eyras E. Predictive models of gene regulation from high-throughput epigenomics data. Comp Funct Gen, 2012; 284786. PMID: 22924024 . DOI: 10.1155/2012/284786.

2012

Original articles in indexed journals - Systems Pharmacology

Areias F, Costa M, Castro M et al. New chromene scaffolds for adenosine A(2A) receptors: Synthesis, pharmacology and structure-activity relationships. Eur J Med Chem, 2012; 54: 303-10. PMID: 22677030 . DOI: 10.1016/j.ejmech.2012.05.009.

2012

Original articles in indexed journals - Evolutionary Genomics - Computational Genomics - group

Rado-Trilla N, Alba MM. Dissecting the role of low-complexity regions in the evolution of vertebrate proteins. BMC Evol Biol, 2012; 24;12(1):155. PMID: 22920595 . DOI: 10.1186/1471-2148-12-155.

2012

Original articles in indexed journals - PharmacoInformatics - Computational Biophysics - GPCR Drug Discovery

Bruno A, Costantino G, de Fabritiis G, Pastor M, Selent J. Membrane-Sensitive Conformational States of Helix 8 in the Metabotropic Glu2 Receptor, a Class C GPCR. PLoS One. 2012;7(8):e42023 . PMID: 22870276 . DOI: 10.1371/journal.pone.0042023.

2012

Original articles in indexed journals - Structural Bioinformatics

Aguilar D, Oliva B, Marino Buslje C. Mapping the mutual information network of enzymatic families in the protein structure to unveil functional features. PLoS One, 2012; 7 (7). PMID: 22848494 . DOI: 10.1371/journal.pone.0041430.

2012



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