Original articles in indexed journals - Integrative Biomedical Informatics

Rodriguez-Gonzalez A, Torres-Nino J, Valencia-Garcia R, Mayer MA, Alor-Hernandez GU. Using experts feedback in clinical case resolution and arbitration as accuracy diagnosis methodology. Comput Biol Med, 2013; 43 (8):975-986. PMID: 23816170 . DOI: 10.1016/j.compbiomed.2013.05.003.

2013

Original articles in indexed journals - Computational Genomics - group - Functional Genomics

Esnaola M, Puig P, Gonzalez D, Castelo R, Gonzalez JR. A flexible count data model to fit the wide diversity of expression profiles arising from extensively replicated RNA-seq experiments. BMC Bioinformatics, 2013; 14(1):254. PMID: 23965047 . DOI: 10.1186/1471-2105-14-254 AUG 21 2013.

2013

Original articles in indexed journals - Computational Genomics - group

Jene-Sanz A, Renta V, Vilkova AV, Khramtsova GF, Khramtsov AI, Olopade OI, Lopez-Bigas N, Benevolenskaya EV. Expression of Polycomb targets predicts breast cancer prognosis. Mol Cell Biol, 2013; 33 (19): 3951-3961. PMID: 23918806 . DOI: 10.1128/MCB.00426.

2013

Original articles in indexed journals - Integrative Biomedical Informatics - PharmacoInformatics - GPCR Drug Discovery

Kaczor AA, Selent J, Sanz F, Pastor M. Modeling Complexes of Transmembrane Proteins: Systematic Analysis of ProteinProtein Docking Tools. Mol Inf, 2013; 32 (8):717-733 DOI: 10.1002/minf.201200150.

2013

Original articles in indexed journals - Integrative Biomedical Informatics - Systems Pharmacology

Coloma PM, Schuemie MJ, Trifirò G, Furlong L, van Mulligen E, Bauer-Mehren A, Avillach P, Kors J, Sanz F, Mestres J, Oliveira JL, Boyer S, Helgee EA, Molokhia M, Matthews J, Prieto-Merino D, Gini R, Herings R, Mazzaglia G, Picelli G, Scotti L, Pedersen L, van der Lei J, Sturkenboom M; EU-ADR consortium. Drug-induced acute myocardial infarction: identifying 'prime suspects' from electronic healthcare records-based surveillance system. PLoS One, 2013; 8(8): e72148. PMID: 24015213 . DOI: 10.1371/journal.pone.0072148.

2013

Original articles in indexed journals - Integrative Biomedical Informatics

Mayer MA, Hocht C, Giani JF, Munoz MC, Carranza A, Taira CA, Dominici FP, Puyo AM, Fernandez BE. Central insulin-angiotensin II interaction in blood pressure regulation in fructose overloaded rats. Regul Peptides, 185 37-43. PMID: 23816464 . DOI: 10.1016/j.regpep.2013.06.001 AUG 10 2013.

2013

Original articles in indexed journals - Integrative Biomedical Informatics

Cases M, Furlong LI, Albanell J, Altman RB, Bellazzi R, Boyer S, Brand A, Brookes AJ, Brunak S, Clark TW, Gea J, Ghazal P, Graf N, Guigo R, Klein TE, Lopez-Bigas N, Maojo V, Mons B, Musen M, Oliveira JL, Rowe A, Ruch P, Shabo A, Shortliffe EH, Valencia A, van der Lei J, Mayer MA, Sanz F. Improving data and knowledge management to better integrate health care and research. J Intern Med 2013; 274 (4): 321-8. PMID: 23808970 . DOI: 10.1111/joim.12105.

2013

Original articles in indexed journals - Computational Genomics - group

International Cancer Genome Consortium Mutation Pathways and Consequences Subgroup of the Bioinformatics Analyses Working Group, Gonzalez-Perez A, Mustonen V, Reva B, Ritchie GR, Creixell P, Karchin R, Vazquez M, Fink JL, Kassahn KS, Pearson JV, Bader GD, Boutros PC, Muthuswamy L, Ouellette BF, Reimand J, Linding R, Shibata T, Valencia A, Butler A, Dronov S, Flicek P, Shannon NB, Carter H, Ding L,Sander C, Stuart JM, Stein LD, Lopez-Bigas N. Computational approaches to identify functional genetic variants in cancer genomes. Nat Methods, 2013; 10 (8): 723-9. PMID: 23900255 . DOI: 10.1038/nmeth.2562.

2013

Original articles in indexed journals - Evolutionary Genomics - Computational Genomics - group

Trilling M, Bellora N, Rutkowski AJ, de Graaf M, Dickinson P, Robertson K, Prazeres da Costa O, Ghazal P, Friedel CC, Alba MM, Dölken L. Deciphering the modulation of gene expression by type I and II interferons combining 4sU-tagging, translational arrest and in silico promoter analysis. Nucleic Acids Res, 2013; 41 (17):8107-8125. PMID: 23832230 . DOI: 10.1093/nar/gkt589 SEP 2013.

2013

Original articles in indexed journals - Computational Science

Perez-Hernandez G, Paul F, Giorgino T, De Fabritiis G, Noé F. Identification of slow molecular order parameters for Markov model construction. J Chem Phys, 2013; 139(1):015102. PMID: 23822324 . DOI: 10.1063/1.4811489.

2013