Original articles in indexed journals - Computational Genomics - group

Bayarmagnai B, Nicolay BN, Islam AB, Lopez-Bigas N, Frolov MV. Drosophila GAGA factor is required for full activation of the dE2F1-Yki/Sd transcriptional program. Cell Cycle, 2012;11(22) : 4191-4202. PMID: 23070566 . DOI: 10.4161/cc.22486.

2012

Original articles in indexed journals - Computational Genomics - group

Beshiri ML, Holmes KB, Richter WF, Hess S, Islam AB, Yan Q, Plante L, Litovchick L, Gévry N, Lopez-Bigas N, Kaelin WG Jr, Benevolenskaya EV. Coordinated repression of cell cycle genes by KDM5A and E2F4 during differentiation. P Natl Acad Sci USA, 2012;  109 (45): 18499-18504. PMID: 23093672 . DOI: 10.1073/pnas.1216724109.

2012

Original articles in indexed journals - Computational Genomics - group

Pippa R, Espinosa L, Gundem G, Garcia-Escudero R, Dominguez A, Orlando S, Gallastegui E, Saiz C, Besson A, Pujol MJ, Lopez-Bigas N, Paramio JM, Bigas A, Bachs O. p27(Kip1) represses transcription by direct interaction with p130/E2F4 at the promoters of target genes. Oncogene, 2012; 31 (38):4207-4220. PMID: 22179826 . DOI: 10.1038/onc.2011.582.

2012

Original articles in indexed journals - Computational Genomics - group

Ng S, Collisson EA, Sokolov A, Goldstein T, Gonzalez-Perez A, Lopez-Bigas N, Benz C, Haussler D, Stuart JM. PARADIGM-SHIFT predicts the function of mutations in multiple cancers using pathway impact analysis. Bioinformatics, 2012; 15;28(18): i640-i646. PMID: 22962493 . DOI: 10.1093/bioinformatics/bts402.

2012

Original articles in indexed journals - Computational Genomics - group

Ingles-Esteve J, Morales M, Dalmases A, Garcia-Carbonell R, Jene-Sanz A, Lopez-Bigas N, Iglesias M, Ruiz-Herguido C, Rovira A, Rojo F, Albanell J, Gomis RR, Bigas A, Espinosa L. Inhibition of Specific NF-kappa B Activity Contributes to the Tumor Suppressor Function of 14-3-3 sigma in Breast Cancer. PLOS ONE, 2012; 7 (5) e38347 . PMID: 22675457 . DOI: 10.1371/journal.pone.0038347.

2012

Original articles in indexed journals - Computational Genomics - group

Gundem G, Lopez-Bigas N. Sample-level enrichment analysis unravels shared stress phenotypes among multiple cancer types. Genome medicine, 2012; 4(3): 28. PMID: 22458606 . DOI: 10.1186/gm327.

2012

Original articles in indexed journals - Computational Genomics - group

Rafael-Palou X, Schroeder MP, Lopez-Bigas N. SVGMap: configurable image browser for experimental data. Bioinformatics, 2012; 28 (1):119-120 . PMID: 22034520 . DOI: 10.1093/bioinformatics/btr581.

2012

Original articles in indexed journals - Computational Genomics - group

Guberman JM, Ai J, Arnaiz O, Baran J, Blake A, Baldock R, Chelala C, Croft D, Cros A, Cutts RJ, Di Genova A, Forbes S, Fujisawa T, Gadaleta E, Goodstein DM, Gundem G, Haggarty B, Haider S, Hall M, Harris T, Haw R, Hu S, Hubbard S, Hsu J, Iyer, V; Jones, P; Katayama, T; Kinsella, R; Kong L, Lawson D, Liang Y, Lopez-Bigas N, Luo J, Lush M, Mason J, Moreews F, Ndegwa N, Oakley D, Perez-Llamas C, Primig M, Rivkin E, Rosanoff S, Shepherd R, Simon R, Skarnes B, Smedley D, Sperling L, Spooner W, Stevenson P, Stone K, Teague J, Wang J, Wang JX, Whitty B, Wong DT, Wong-Erasmus M, Yao L, Youens-Clark K, Yung C, Zhang JJ, Kasprzyk A. BioMart Central Portal: an open database network for the biological community. Database-the journal of biological databases and curation, 2011.. PMID: 21930507 . DOI: 10.1093/database/bar041.

2011

Original articles in indexed journals - Computational Genomics - group

Truscott M, Islam ABMMK, Lopez-Bigas N, Frolov MV. mir-11 limits the proapoptotic function of its host gene, dE2f1. Genes & Development, 2011; 25 (17): 1820-1834. PMID: 21856777 . DOI: 10.1101/gad.16947411.

2011

Original articles in indexed journals - Computational Genomics - group

Perez-Llamas C, Gundem G, Lopez-Bigas N. Integrative Cancer Genomics (IntOGen) in Biomart. Database (Oxford) 2011:bar039. PMID: 21903633 . DOI: 10.1093/database/bar039.

2011