Original articles in indexed journals - Computational Genomics > Regulatory Genomics - Computational Genomics

Plass M, Codony-Servat C, Ferreira PG, Vilardell J, Eyras E. RNA secondary structure mediates alternative 3'ss selection in Saccharomyces cerevisiae. RNA, 2012. . PMID: 22539526 .

2012

Original articles in indexed journals - Integrative Biomedical Informatics - Chemogenomics

Flachner B, Lörincz Z, Carotti A, Nicolotti O, Kuchipudi P, Remez N, Sanz F, Tóvári J, Szabó MJ, Bertók B, Cseh S, Mestres J, Dormán G. A chemocentric approach to the identification of cancer targets. PLoS ONE, 2012;  7: 4. PMID: 22558171 . DOI: e35582.

2012

Original articles in indexed journals - Computational Genomics > Evolutionary Genomics - Computational Genomics

Shikhagaie M, Merce-Maldonado E, Isern E, Muntasell A, Alba MM, Lopez-Botet M, Hengel H, Angulo A. The Human Cytomegalovirus-Specific UL1 Gene Encodes a Late-Phase Glycoprotein Incorporated in the Virion Envelope. Journal of Virology, 86 (8):4091-4101. PMID: 22345456 . DOI: 10.1128/JVI.06291-11.

2012

Original articles in indexed journals - Computer-Assisted Drug Design

Oddi S, Dainese E, Sandiford S, Fezza F, Lanuti M, Chiurchiu V, Totaro A, Catanzaro G, Barcaroli D, De Laurenzi V, Centonze D, Mukhopadhyay S, Selent J, Howlett AC, Maccarrone M. Effects of palmitoylation of Cys(415) in helix 8 of the CB1 cannabinoid receptor on membrane localization and signalling. British Journal of Pharmacology, 2012; 165 (8):2635-2651. PMID: 21895628 . DOI: 10.1111/j.1476-5381.2011.01658.x.

2012

Original articles in indexed journals - Integrative Biomedical Informatics

Beck T, Gollapudi S, Brunak S, Graf N, Lemke HU, Dash D, Buchan I, Díaz C, Sanz F, Brookes AJ. Knowledge engineering for health: A new discipline required to bridge the “ICT gap” between research and healthcare. Hum Mutat, 2012; 33 (5): 797-802. PMID: 22392843 . DOI: 10.1002/humu.22066.

2012

Original articles in indexed journals - Computational Biochemistry and Biophysics > Computational Biophysics

Giorgino T, Buch I, De Fabritiis G. Visualizing the Induced Binding of SH2-Phosphopeptide. J Chem Theory Comput, 2012; 8  (4): 1171-1175 DOI: 10.1021/ct300003f.

2012

Original articles in indexed journals - Computational Genomics > Regulatory Genomics - Computational Genomics

Erb I, González-Vallinas JR, Bussotti G, Blanco E, Eyras E, Notredame C. Use of ChIP-Seq data for the design of a multiple promoter-alignment method. Nucleic Acids Res, 2012; 40 (7): e52. PMID: 22230796 .

2012

Original articles in indexed journals - Chemogenomics

Gallastegui E, Marshall B, Vidal D, Sánchez G, Sánchez S, Collado JA, Luque N, Terme J-M, Gatell JM, Muñoz E, Mestres J, Verdin E, Jordan A. Combination of Biological Screening in a Cellular Model of Viral Latency with Virtual Screening Identifies Novel Compounds that Reactivate HIV-1. Journal of Virology, 2012; 86, 3795-3808. PMID: 22258251 . DOI: 10.1128/JVI.05972-11.

2012

Original articles in indexed journals - Integrative Biomedical Informatics - Chemogenomics

Bauer-Mehren A, van Mulligen EM, Avillach P, Carrascosa MC, Garcia-Serna R, Piñero J, Singh B, Lopes P, Oliveira JL, Diallo G, Ahlberg Helgee E, Boyer S, Mestres J, Sanz F, Kors JA, Furlong LI. Automatic Filtering and Substantiation of Drug Safety Signals. PLoS Comput Biol, 2012; 8(4). PMID: 22496632 . DOI: 10.1371/journal.pcbi.1002457.

2012

Original articles in indexed journals - Computational Genomics > Evolutionary Genomics - Computational Genomics

Toll-Riera M, Rado-Trilla N, Martys F, Alba MM. Role of low-complexity sequences in the formation of novel protein coding sequences. Mol Biol Evol, 2012; 29(3):883-6. PMID: 22045997 . DOI: ; 10.1093/molbev/msr263.

2012