PhD Thesis - Structural Bioinformatics

Guney E. Role of network topology based methods in discovering novel gene-phenotype associations. Director: Oliva B. September, 21 2012

2012

Other - Integrative Biomedical Informatics - Chemogenomics

Coloma PM, Schuemie MJ, Trifiro G, Furlong L, Van Mulligen E, Bauer-Mehren A, Avillach P, Kors J, Sanz F, Mestres J, Oliveira JL, Boyer S, Helgee EA, Molokhia M, Matthews J, Prieto-Merino D, Gini R, Herings RMC, Mazzaglia G, Picelli G, Scotti L, Pedetsen L, Van der Lei J, Sturkenboom MCJM. Triage and Evaluation of Potential Safety Signals Identified from Electronic Healthcare Record Databases. Drug Safety, 2012; 35 (10):905-905

2012

Original articles in indexed journals - Integrative Biomedical Informatics

Molero, E; Diaz, C; Sanz, F; Oliveira, JL; Trifiro, G; Fourrier-Reglat, A; Molokhia, M; Pedersen, L; Boyer, S; Scotti, L; Gini, R; Herings, R; Giaquinto, C; Loza, MI; Mazzaglia, G; van der Lei, J; Sturkenboom, M. The EU-ADR Alliance: A Federated Collaborative Framework for Drug Safety Studies. Pharmacoepidem Dr S, 2012; 21 311-312

2012

Original articles in indexed journals - Computational Genomics > Regulatory Genomics - Computational Genomics

Macias S, Plass M, Stajuda A, Michlewski G, Eyras E, Caceres JF. DGCR8 HITS-CLIP reveals novel functions for the Microprocessor. Nat Struct Mol Biol, 2012; 19 (8):760-766. PMID: 22796965 . DOI: 10.1038/nsmb.2344.

2012

Original articles in indexed journals - Computational Genomics > Regulatory Genomics - Computational Genomics

Althammer S, Pages A, Eyras E. Predictive models of gene regulation from high-throughput epigenomics data. Comp Funct Gen, 2012; 284786. PMID: 22924024 . DOI: 10.1155/2012/284786.

2012

Original articles in indexed journals - Structural Bioinformatics

Sanz-Pamplona R, Garcia-Garcia J, Franco S, Messeguer X, Driouch K, Oliva B, Sierra A. A taxonomy of organ-specific breast cancer metastases based on a protein-protein interaction network. Mol Biosyst, 2012; 8 (8): 2085-2096. PMID: 22710377 . DOI: 10.1039/c2mb25104c.

2012

Original articles in indexed journals - Structural Bioinformatics

Aguilar D, Oliva B, Marino Buslje C. Mapping the mutual information network of enzymatic families in the protein structure to unveil functional features. PLoS One, 2012; 7 (7). PMID: 22848494 . DOI: 10.1371/journal.pone.0041430.

2012

Original articles in indexed journals - PharmacoInformatics - Computational Biochemistry and Biophysics > Computational Biophysics

Bruno A, Costantino G, de Fabritiis G, Pastor M, Selent J. Membrane-Sensitive Conformational States of Helix 8 in the Metabotropic Glu2 Receptor, a Class C GPCR. PLoS One. 2012;7(8):e42023. PMID: 22870276 . DOI: 10.1371/journal.pone.0042023.

2012

Original articles in indexed journals - Computational Genomics > Evolutionary Genomics - Computational Genomics

Rado-Trilla N, Alba MM. Dissecting the role of low-complexity regions in the evolution of vertebrate proteins. BMC Evol Biol, 2012; 24;12(1):155. PMID: 22920595 . DOI: 10.1186/1471-2148-12-155.

2012

Original articles in indexed journals - Chemogenomics

Areias F, Costa M, Castro M et al. New chromene scaffolds for adenosine A(2A) receptors: Synthesis, pharmacology and structure-activity relationships. Eur J Med Chem, 2012; 54: 303-10. PMID: 22677030 . DOI: 10.1016/j.ejmech.2012.05.009.

2012