Original articles in indexed journals - Computational Genomics - group

Gonzalez-Perez A, Lopez-Bigas N. Improving the assessment of the outcome of non-synonymous SNVs with a Consensus deleteriousness score (Condel). AJHG, 2011; 88 (4): 440-449. PMID: 21457909 . DOI: 10.1016/j.ajhg.2011.03.004.

2011

Original articles in indexed journals - Computational Science

Harvey MJ, De Fabritiis G. Swan: A tool for porting CUDA programs to OpenCL. Comp Phys Commun, 2011. 182: 1093 DOI: 10.1016/j.cpc.2010.12.052.

2011

Original articles in indexed journals - Structural Bioinformatics

Feliu E, Aloy P, Oliva B. On the analysis of protein-protein interactions via knowledge-based potentials for the prediction of protein-protein docking. Protein Sci 2011; 20(3):529-41. PMID: 21213252 . DOI: 10.1002/pro.585.

2011

Original articles in indexed journals - Computational Genomics - group - Functional Genomics

Hartmann B, Castelo R, Miñana B, Peden E, Blanchette M, Rio DC, Singh R, Valcárcel J. Distinct regulatory programs establish widespread sex-specific alternative splicing in Drosophila melanogaster. Rna, 2011. 17(3):453-68. PMID: 21233220 . DOI: 21233220.

2011

Original articles in indexed journals - Computational Biochemistry

Maier D, Kalus W, Wolff M, Kalko SG, Roca J, Mas IM, Turan N, Cascante M, Falciani F, Hernández M, Villa-Freixa J, Losko S. Knowledge Management for Systems Biology; a general and visually driven framework applied to translational medicine. BMC Syst Biol, 2011; vol 5; 38. PMID: 21375767 . DOI: 10.1186/1752-0509-5-38.

2011

Original articles in indexed journals - PharmacoInformatics

Blasi D, Arsequell A, Valencia G, Nieto J, Planas A, Pinto M, Centeno NB, Abad-Zapatero C, Quintana J. Retrospective Mapping of SAR Data for TTR Protein in Chemico-Biological Space Using Ligand Efficiency Indices as a Guide to Drug Discovery Strategies. Molecular Informatics, 2011. 30(2-3):161-167. PMID: 21838431 . DOI: 10.1002/minf.201000157.

2011

Original articles in indexed journals - Integrative Biomedical Informatics - PharmacoInformatics

Obiol-Pardo C, Gomis-Tena J, Sanz F, Saiz J, Pastor M. A Multiscale Simulation System for the Prediction of Drug-Induced Cardiotoxicity. Journal of Chemical Information and Modeling, 2011. 51(2):483-92. PMID: 21250697 . DOI: 10.1021/ci100423z.

2011

Original articles in indexed journals - Computational Genomics - group

Islam A, Richter W, Lopez-Bigas N, Benevolenskaya EV. Selective targeting of histone methylation. Cell Cycle, 2011; 10(3):413-24.. PMID: 21270517 . DOI: 10.4161/cc.10.3.14705.

2011

Original articles in indexed journals - Systems Pharmacology

Vidal D, Garcia-Serna R, Mestres J. Ligand-based approaches to in silico pharmacology. Methods Mol. Biol. 2011; 672: 489-502.. PMID: 20838981 .

2011

Original articles in indexed journals - Computational Biochemistry

Lawford PV, Narracott AV, McCormack K, Bisbal J, Martin C,  Bijnens B, Brook B, Zachariou M, Villà–Freixa J, Kohl P, Fletcher K, Diaz-Zuccarini V. Virtual physiological human: training challenges. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences. Vol. 369; iss 1935; p 494. 2011 DOI: http://rsta.royalsocietypublishing.org/content/369/1935/494.long.

2011