Original articles in indexed journals - Computational Genomics - group - Functional Genomics

Hänzelmann S, Castelo R, Guinney J. GSVA: gene set variation analysis for microarray and RNA-Seq data. BMC Bioinformatics, 2013; 16;14(1):7. PMID: 23323831 . DOI: 10.1186/1471-2105-14-7.

2013

Original articles in indexed journals - Computational Genomics - group

Hernando H, Shannon-Lowe C, Islam AB, Al-Shahrour F, Rodriguez-Ubreva J, Rodriguez-Cortez VC, Javierre BM, Mangas C, Fernandez AF, Parra M, Delecluse HJ, Esteller M, Lopez-Granados E, Fraga MF, Lopez-Bigas N, Ballestar E. The B cell transcription program mediates hypomethylation and overexpression of key genes in Epstein-Barr virus-associated proliferative conversion. Genome Biol, 2013; 14 (1): R3. PMID: 23320978 . DOI: 10.1186/gb-2013-14-1-r3.

2013

Original articles in indexed journals - Integrative Biomedical Informatics - PharmacoInformatics

Cases M, Pastor M, Sanz F. The eTOX Library of Public Resources for in Silico Toxicity Prediction. Mol Inf, 2013; 32: 24–35. DOI: 10.1002/minf.201200099.

2013

Original articles in indexed journals - Computational Genomics - group

Schroeder MP, Gonzalez-Perez A, Lopez-Bigas N. Visualizing multidimensional cancer genomics data. Genome Med, 2013; 31;5(1):9. PMID: 23363777 . DOI: 10.1186/gm413.

2013

Original articles in indexed journals - Evolutionary Genomics - Computational Genomics - group

Villanueva-Cañas JL, Laurie S, Alba MM. Improving genome-wide scans of positive selection by using protein isoforms of similar length. Genome Biol Evol, 2013; 5 (2): 457-467. PMID: 23377868 . DOI: 10.1093/gbe/evt017 2013.

2013

Original articles in indexed journals - Systems Pharmacology

Baumann K, Ecker GF, Mestres J, Schneider G. Sustained Success of Molecular Informatics. Mol Inform, 2013;32(1):3-3 SI DOI: 10.1002/minf.201380132.

2013

Original articles in indexed journals - Computational RNA Biology - Computational Genomics - group

Ballaré C, Castellano G, Gaveglia L, Althammer S, González-Vallinas J, Eyras E, Le Dily F, Zaurin R, Soronellas D, Vicent GP, Beato M. Nucleosome-Driven Transcription Factor Binding and Gene Regulation. Mol Cell, 2012; 49 (1):67-79. PMID: 23177737 . DOI: 10.1016/j.molcel.2012.10.019.

2012

Original articles in indexed journals - Computational Genomics - group

Gonzalez-Perez A, Deu-Pons J, Lopez-Bigas N. Improving the prediction of the functional impact of cancer mutations by baseline tolerance transformation. Genome Med, 2012; 4(11):89. PMID: 23181723 .

2012

Original articles in indexed journals - Computational Science

Sadiq SK, Noé F, De Fabritiis G. Kinetic characterization of the critical step in HIV-1 protease maturation. Proc Natl Acad Sci U S A, 2012; 109; 50: 20449-20454. PMID: 23184967 . DOI: 10.1073/pnas.1210983109.

2012

Original articles in indexed journals - Computational Genomics - group - Functional Genomics

Roverato A, Castelo R. Learning undirected graphical models from multiple datasets with the generalized non-rejection rate. International Journal of Approximate Reasoning, 2012; 53; 9: 1326–1335 DOI: 10.1016/j.ijar.2012.05.007.

2012